rs9845520 chr3:152474790 A>T
- Sequence
tccagcagatgtcagtgttggcgt[A/T]tgatgtaatctagaaattcctcca
- ASB in cell types
- GM12890 (Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi) smooth muscle cell
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.90 | 0.45 | 1.27 | n/a | No Hit | |||
| STAG1_HUMAN | 0.50 | 0.10 | 1.00 | n/a | n/a |
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