rs9845906 chr3:53196308 C>G

Sequence
ctggtatttttaggatctccggac[C/G]gccctaaattcaaccattccaacg
ASB in cell types
neutrophils from periferal blood GM02255 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.64 1.00 1.008.9·10-7 1.13 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  hdl cholesterol,  homa-b
GTEx eQTL Artery_Aorta,  Brain_Cerebellum,  Esophagus_Mucosa,  Skin_Sun_Exposed_Lower_leg,  Testis,  Whole_Blood

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