rs9847010 chr3:27340723 A>G
- Sequence
aaaaactaacagatgaggatgtgg[A/G]taagagggaactcatacactgttt
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) Jurkat (T-cells) CTV-1 (Adult T acute lymphoblastic leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CDK9_HUMAN MYB_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | -1.38 | 2.63 | 1.00 | n/a | n/a | |||
| MYB_HUMAN | -1.36 | 2.31 | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | -1.26 | 1.71 | 1.00 | 0.24 | Weak Concordant |
Items per page:
1 – 3 of 3
Motif analysis
Genetic associations
GTEx eQTL Brain_Cortex, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Muscularis, Heart_Left_Ventricle, Liver, Testis