rs9851926 chr3:151572875 G>C
- Sequence
gcatttagtgctataagtttccct[G/C]tacacactgctttaaatgtgtccc
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.92 | 1.01 | 1.48 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.51 | -0.52 | 1.50 | -3.96 | Concordant |
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Motif analysis
