rs9852327 chr3:191263615 T>C

Sequence
tcaaagaattaccaccagaacagg[T/C]taggaccagctaagcacacatcat
ASB in cell types
VCaP (prostate carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.01 0.06 7.8·10-31.00 1.73 n/a No Hit
FOXA1_HUMAN 1.82 -0.22 0.021.00 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Heart_Atrial_Appendage Liver Nerve_Tibial Thyroid

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