rs985665 chr1:100807976 G>A

Sequence
agagaaaggaaaaacaatataaag[G/A]caaacaaaaaggaagagcttggtt
ASB in cell types
LHSAR (prostate epithelial cells)
ASB for transcription factors
IKZF2_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 1.95 -0.53 0.041.00 1.00 n/a n/a
ANDR_HUMAN 2.03 0.24 0.041.00 1.75 -1.75 Weak Concordant
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Motif analysis

ANDR_HUMAN Weak Concordant
ANDR_HUMAN pic

Genetic associations

GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts

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