rs986212 chr10:114551772 C>T

Sequence
agggctttctagaatcaggtacca[C/T]gtgagggctttgtaaacatggtac
ASB in cell types
MCF7 WS8 cells
ASB for transcription factors
FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.11 0.03 7.2·10-71.00 1.84 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP abnormal involuntary movement scale,  bipolar disorder,  birth weight,  body mass index (bmi),  comorbid depressive syndrome and alcohol dependence,  fasting blood glucose,  hdl cholesterol,  homa-b,  tardive dyskinesia,  tetrology of fallot
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa

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