rs988069 chr20:19206071 A>C
- Sequence
cagtcaagggcaggtaggaaacac[A/C]tctcaggcacacagaaatccccca
- ASB in cell types
- GSC23 (Glioblastoma) neural cell epidermal keratinocytes HCM (cardiac myocytes)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GSC23 (Glioblastoma) | 2.12 | n/a | 3.00 | |||
| neural cell | -0.15 | 2.00 | 1.00 | |||
| epidermal keratinocytes | -0.72 | 2.53 | 2.00 | |||
| HCM (cardiac myocytes) | 2.25 | 0.23 | 1.25 | |||
| foreskin keratinocyte | n/a | 0.44 | 2.50 |
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