rs988515 chr11:26043936 A>G
- Sequence
cacattgaaatttattaaatagca[A/G]ttttgatgattgtgggccaagtgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ELF1_HUMAN IKZF2_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | -2.88 | 3.05 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -1.11 | 2.15 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -0.91 | 1.92 | 1.25 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP lung function, predicted ratio of forced expiratory volume in 1 second (fev1) to forced vital capacity (fvc) (fev1/fvc), lung function, ratio of forced expiratory volume in 1 second (fev1) to forced vital capacity (fvc) (fev1/fvc), total cholesterol change with statins