rs988593 chr5:9156572 A>G
- Sequence
agggaggcaggggaagcaaggctc[A/G]tgggagaacttatgtgagagaccc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM18486 (Lymphoblastoid Cell Lines) GM02255 (Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.00 | 0.96 | 1.34 | n/a | No Hit |
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