rs9898914 chr17:65123412 C>T
- Sequence
gtgggcaaccgccggaagccgaca[C/T]cctgagcccgcatttcctctctag
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) CTV-1 (Adult T acute lymphoblastic leukemia) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN SPI1_HUMAN NELFA_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.61 | 0.23 | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | 0.35 | 1.60 | 1.38 | n/a | No Hit | |||
| NELFA_HUMAN | 2.15 | -0.07 | 1.50 | n/a | n/a | |||
| MNT_HUMAN | 2.31 | 0.71 | 2.00 | n/a | No Hit | |||
| ZBT11_HUMAN | 2.39 | -5.01 | 2.00 | n/a | n/a |
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Motif analysis
