rs989922 chr5:163916575 G>A
- Sequence
gttttgctgtggtttagaggagaa[G/A]gaacaagcctcttacccaagctgt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- STAT1_HUMAN SKI_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 2.94 | 2.00 | n/a | No Hit | |||
| SKI_HUMAN | -1.66 | 1.92 | 2.00 | n/a | n/a | |||
| IKZF2_HUMAN | -0.64 | 1.68 | 1.00 | n/a | n/a |
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