rs990106 chr7:107836425 C>G
- Sequence
gtggagaaaatcttttgcccgttg[C/G]caacagatgaactattttcccaat
- ASB in cell types
- CD34+ hematopoietic stem cells-derived proerythroblasts MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- GATA1_HUMAN GATA3_HUMAN TAL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | -0.64 | 4.12 | 1.83 | 0.79 | Weak Concordant | |||
| GATA3_HUMAN | n/a | 3.27 | 1.00 | n/a | No Hit | |||
| TAL1_HUMAN | -1.55 | 2.61 | 2.00 | 1.40 | Weak Concordant |
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Motif analysis
