rs990906 chr13:33542013 G>C

Sequence
tgataaaagaccaaggccacacca[G/C]aaaacacagaatataaaactgtgt
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -1.14 3.11 0.985.7·10-4 2.00 0.14 Weak Concordant
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Motif analysis

ANDR_HUMAN Weak Concordant
ANDR_HUMAN pic

Genetic associations

GRASP adiponectin levels,  ldl cholesterol,  triglycerides
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic

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