rs996492 chr9:115413752 T>C

Sequence
tatgtttattttttttatcagtta[T/C]acagctcttagcacgagcaggatt
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -5.27 1.64 1.008.1·10-3 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  bipolar disorder,  college completion,  ldl cholesterol,  obesity with early age of onset (age >2),  parkinsons disease,  years of education
GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Nerve_Tibial

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