rs996836 chr10:8128557 A>T

Sequence
gttcttctgttgatcagatgtaag[A/T]cctctgttttcactctaatcacac
ASB in cell types
breast tumor MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
ASB for transcription factors
ESR1_HUMAN NDF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 0.43 0.87 1.009.8·10-4 1.62 n/a No Hit
NDF1_HUMAN 2.88 -5.39 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy)

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