rs997780 chr4:176014762 C>A
- Sequence
gagaaaaataaaaatgaaaaaggg[C/A]agtgagaaaaaagaaagtaagaaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) monocyte-derived dendritic cells
- ASB for transcription factors
- IKZF2_HUMAN SPI1_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | n/a | 3.26 | 2.00 | n/a | n/a | |||
| SPI1_HUMAN | 1.04 | 3.36 | 2.83 | 7.50 | Concordant | |||
| IKZF1_HUMAN | n/a | 2.77 | 4.00 | n/a | n/a |
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Motif analysis
