rs999508 chr2:128309843 G>A

Sequence
gctgacggctcgctctccagatga[G/A]gaactgggcctgcactaggctgca
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
RBM25_HUMAN NR1H4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN 2.19 0.11 0.020.82 2.00 n/a n/a
NR1H4_HUMAN 1.41 -4.21 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  height,  ldl cholesterol change with statins,  parkinsons disease,  refractive error,  total cholesterol change with statins,  triglycerides
GTEx eQTL Artery_Tibial,  Esophagus_Mucosa,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Thyroid

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