ADASTRA v6.1.1
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rs999508
chr2:128309843
G
>
A
Sequence
gctgacggctcgctctccagatga[G/A]gaactgggcctgcactaggctgca
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
RBM25_HUMAN
NR1H4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN
2.19
0.11
0.02
0.82
2.00
n/a
n/a
NR1H4_HUMAN
1.41
-4.21
0.02
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
,
height
,
ldl cholesterol change with statins
,
parkinsons disease
,
refractive error
,
total cholesterol change with statins
,
triglycerides
GTEx eQTL
Artery_Tibial
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)