rs999802 chr3:112408433 A>G
- Sequence
gatatcgagataaaacatgcttgt[A/G]tcagtcatttgtttagtacttaag
- ASB in cell types
- LNCaP (prostate carcinoma) LN95(Prostate adenocarcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN A2NVP9_HUMAN GATA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.66 | 1.87 | 2.37 | n/a | No Hit | |||
| ANDR_HUMAN | -0.06 | 1.15 | 1.71 | n/a | No Hit | |||
| A2NVP9_HUMAN | -0.56 | 1.98 | 1.50 | n/a | n/a | |||
| GATA2_HUMAN | -0.15 | 1.77 | 1.50 | n/a | No Hit | |||
| HXB13_HUMAN | 1.01 | 1.91 | 2.58 | n/a | No Hit |
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