rs999915 chr1:84873395 C>T
- Sequence
taaataaacaaatattaaaaataa[C/T]ttttaaagaggaggcatgttgttg
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- HXB13_HUMAN TBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HXB13_HUMAN | 1.19 | -0.47 | 1.50 | 0.00 | Weak Discordant | |||
| TBP_HUMAN | 1.87 | 0.18 | 1.00 | -1.04 | Weak Concordant |
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Motif analysis
