rs999953 chr5:147576885 T>C
- Sequence
gccatggcgcctggcccacttaca[T/C]agttttctcattcatattcaggca
- ASB in cell types
- LNCaP (prostate carcinoma) GM18486 (Lymphoblastoid Cell Lines)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| LNCaP (prostate carcinoma) | -0.94 | 1.56 | 1.00 | |||
| GM18486 (Lymphoblastoid Cell Lines) | -1.90 | 2.07 | 1.00 |
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