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rs276215 chr10:104329624 T>G

Sequence
acacaggctcatttccactcctac[T/G]gtcaccgagaaagaaacagcccaa
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
JUN_HUMAN EP300_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN -0.64 1.42 1.007.5·10-5 2.00 n/a No Hit
EP300_HUMAN -0.39 1.41 1.002.1·10-3 1.83 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP biploar disorder (bipolar schizoaffective disorder) bipolar disorder college completion diastolic blood pressure (dbp) hdl cholesterol hdl cholesterol change with statins obesity with early age of onset (age >2)
GTEx eQTL Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Pituitary Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Testis Thyroid Whole_Blood

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