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rs307896 chr19:47158236 G>A

Sequence
actttgtgctcctaaattagtaac[G/A]ttgaaaaacaaaaaggaaaaacag
ASB in cell types
GM12878 (female B-cells)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells) 0.23 0.80 1.003.4·10-3 1.26
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Motif analysis

No data available

Genetic associations

EMBL-EBI multiple sclerosis multiple sclerosis and triglyceride levels (pleiotropy)
GRASP arthritis including non-rheumatoid hdl cholesterol height multiple sclerosis schizophrenia systolic blood pressure (sbp) triglycerides
PheWAS abnormal findings examination of lungs abnormal reflex acute cystitis acute posthemorrhagic anemia allergic rhinitis alopecia anorexia aphakia and other disorders of lens appendicitis asthma benign neoplasm of other endocrine glands benign neoplasm of respiratory and intrathoracic organs bronchitis choroidal degenerations chronic pharyngitis and nasopharyngitis chronic sinusitis chronic venous hypertension corneal degenerations cystitis and urethritis delirium due to conditions classified elsewhere depression diffuse diseases of connective tissue diseases of hair and hair follicles diseases of the salivary glands disorders of choroid disorders of cornea disorders of lacrimal system disorders of optic nerve and visual pathways dry eyes duodenal ulcer dysthymic disorder epistaxis or throat hemorrhage eustachian tube disorders fracture of lower limb fracture of neck of femur genital prolapse gross hematuria hemorrhage from gastrointestinal ulcer hypertensive chronic kidney disease hypertensive heart and/or renal disease hypoglycemia hypopotassemia hypotension nos inflammatory disease of breast known or suspected fetal abnormality left bundle branch block lipoma mechanical complication due to other implant and internal device megaloblastic anemia mood disorders myeloid leukemia nasal polyps neoplasm of uncertain behavior obesity obstructive sleep apnea other cardiac conduction disorders other disorders of bladder other disorders of the nervous system other hypertensive complications pain in limb pericarditis pernicious anemia primary thrombocytopenia prolapse of vaginal walls prostate cancer scar conditions and fibrosis of skin scleritis and episcleritis sensorineural hearing loss sleep apnea spermatocele stress incontinence, female systemic lupus erythematosus uterine leiomyoma uterine/uterovaginal prolapse vascular disorders of penis viral infection
Finemapping multiple sclerosis
GTEx eQTL Adipose_Subcutaneous Brain_Caudate_basal_ganglia Brain_Cerebellum Brain_Cortex Cells_Cultured_fibroblasts Colon_Transverse Lung Nerve_Tibial Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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