rs610604 chr6:137878280 G>T
- Sequence
cagatcatgttgcgtgaaaagtgt[G/T]agctcttcatcacaggcctgcatt
- ASB in cell types
- CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 2.62 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP arthritis including non-rheumatoid, hip bone mineral density (bmd), ldl cholesterol, neuroblastoma (brain cancer), psoriasis, psoriasis (cutaneous psoriasis), psoriatic arthritis, rheumatoid arthritis, spine bone mineral density (bmd), total cholesterol
PheWAS abnormal coagulation profile, abnormal findings on study of brain, nervous system, abnormal papanicolaou smear of cervix and cervical hpv, acute, but ill-defined cerebrovascular disease, alkalosis, anemia in neoplastic disease, ankylosis of joint, anomalies of tooth position/malocclusion, atherosclerosis, attention deficit hyperactivity disorder, biliary cirrhosis, blister, bronchitis, bronchopneumonia and lung abscess, cancer of oropharynx, carbohydrate transport and metabolism disorder, cholelithiasis and cholecystitis, chronic airway obstruction, chronic osteomyelitis, chronic prostatitis, coagulation defects, complication of internal orthopedic device, conductive hearing loss, congenital musculoskeletal deformities of spine, deficiency anemias nos, disaccharide malabsorption, diseases of spleen, disorders of fluid, electrolyte, and acid-base balance, disturbances of sensation of smell and taste, diverticulitis, diverticulosis and diverticulitis, elevated prostate specific antigen, first degree av block, fracture of upper limb, genu valgum or varum (acquired), heart failure, hemorrhage of gastrointestinal tract, hemorrhagic disorder due to intrinsic circulating anticoagulants, herpes simplex, hyperglyceridemia, hypertension complicating pregnancy, hypovolemia, ill-defined descriptions and complications of heart disease, infection/inflammation of internal prosthetic device, implant or graft, inflammatory conditions of jaw, intestinal obstruction without mention of hernia, intracranial hemorrhage, iron deficiency anemia secondary to blood loss, keratoderma, acquired, lung disease due to external agents, lyme disease, memory loss, neurological disorders due to brain damage, non-healing surgical wound, noninfectious gastroenteritis, nonrheumatic aortic valve disorders, optic atrophy, orthostatic hypotension, osteitis deformans and osteopathies associated with other disorders, other abnormality of urination, other benign neoplasm of connective and other soft tissue, other intestinal obstruction, other specified disorders of breast, otitis media, paralytic ileus, photodermatitis & sunburn, pneumonitis due to inhalation of food or vomitus, prostate cancer, pseudomonal pneumonia, pulmonary collapse, interstitial/compensatory emphysema, raynauds syndrome, reflux esophagitis, retention of urine, seborrhea, secondary malignant neoplasm of liver, sleep disorders, spirochetal infection, stricture/obstruction of ureter, suppurative and unspecified otitis media, symptoms involving cardiovascular system, symptoms/disorders of the urinary system, syncope and collapse, systolic/diastolic heart failure, torticollis, toxic erythema, type 2 diabetic peripheral circulatory disorders, unspecified local infection of skin and subcutaneous tissue, urinary obstruction