rs1004678 chr9:122465188 C>T
- Sequence
ccaaattaccactagggggcctgc[C/T]agtctcaagaaaaattttgcgcgt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) foreskin keratinocyte neural cell adult erythroblasts
- ASB for transcription factors
- FOXK2_HUMAN ANDR_HUMAN SMC3_HUMAN KDM6A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.22 | -1.88 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.38 | -0.54 | 1.75 | n/a | No Hit | |||
| SMC3_HUMAN | -0.40 | 1.71 | 1.00 | n/a | n/a | |||
| KDM6A_HUMAN | 2.45 | n/a | 3.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.60 | -0.26 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 5