rs10053947 chr5:42912455 G>A
- Sequence
cattctcatgagagaatttattta[G/A]gatatacatcgtccttcagcaaaa
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) 2588 (Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line) prostate gland
- ASB for transcription factors
- CTCF_HUMAN GATA3_HUMAN STAG1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.62 | 0.97 | 1.58 | n/a | No Hit | |||
| GATA3_HUMAN | n/a | 3.02 | 3.00 | n/a | No Hit | |||
| STAG1_HUMAN | 0.97 | 0.76 | 1.10 | n/a | n/a | |||
| RAD21_HUMAN | 0.44 | 0.91 | 1.78 | n/a | n/a |
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