rs10057528 chr5:124952259 G>C
- Sequence
gtttctcctgttgtccaggctgat[G/C]tcaaactcatgagctcaagcagtt
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) GM02255 (Lymphoblastoid Cell Lines) GM01310 ( Transformed lymphovlasoid cell line )
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN AHR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.35 | 1.79 | 1.37 | n/a | No Hit | |||
| STAG1_HUMAN | 1.59 | 0.39 | 1.26 | n/a | n/a | |||
| AHR_HUMAN | 2.08 | -0.26 | 1.00 | n/a | No Hit |
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