rs1007379 chr6:145091323 T>A

Sequence
tattgcataagagtggcagtgggc[T/A]aggggctaggcagagaaattgcga
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
HLF_HUMAN CEBPA_HUMAN CEBPG_HUMAN FOXA3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HLF_HUMAN 3.36 n/a 1.6·10-41.00 2.00 n/a No Hit
CEBPA_HUMAN n/a 1.91 1.000.01 3.00 n/a No Hit
CEBPG_HUMAN n/a 2.05 1.000.01 2.00 n/a No Hit
FOXA3_HUMAN -1.79 2.73 1.000.05 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Gastroesophageal_Junction

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