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rs1007686 chr1:228463756 A>G

Sequence
gagggaggaaaggggcgggagaag[A/G]acggacccaagcgcctccgcccag
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
VEZF1_HUMAN ZBTB5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
VEZF1_HUMAN 1.33 -3.85 0.031.00 2.00 1.05 Weak Discordant
ZBTB5_HUMAN 1.30 n/a 0.041.00 2.75 n/a n/a
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Motif analysis

VEZF1_HUMAN Weak Discordant
VEZF1_HUMAN pic

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Skin_Sun_Exposed_Lower_leg Thyroid

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