rs10157942 chr1:16896254 C>G
- Sequence
gttaatcctacagtggagggctgg[C/G]gaataggaagtaacatgtcgcctg
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma) HT29 (colon adenocarcinoma)
- ASB for transcription factors
- MAF_HUMAN ZNF24_HUMAN RFX1_HUMAN ZN395_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAF_HUMAN | n/a | 2.93 | 2.75 | n/a | No Hit | |||
| ZNF24_HUMAN | 2.24 | -1.39 | 2.50 | n/a | n/a | |||
| RFX1_HUMAN | 1.74 | -1.01 | 2.00 | n/a | No Hit | |||
| ZN395_HUMAN | 1.93 | -1.33 | 1.00 | n/a | n/a | |||
| ZSC29_HUMAN | 2.51 | -4.87 | 2.00 | n/a | n/a |
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