rs10168940 chr2:128746458 A>T
- Sequence
aagggtgaggttgtggagtctata[A/T]gagggcttaaggcatttggctcag
- ASB in cell types
- iPS-derived dermal fibroblasts BJ (fibroblasts)
- ASB for transcription factors
- RARA_HUMAN P63_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 2.33 | -1.60 | 1.00 | n/a | No Hit | |||
| P63_HUMAN | -0.19 | 1.75 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), aortic valve calcium, hdl cholesterol