rs10174949 chr2:8302118 G>A

Sequence
gccttccagctgcagatcatcggg[G/A]ttttcttaaatgctgccaaggaag
ASB in cell types
monocyte-derived macrophages from peripheral blood CD14+ monocytes MDM(monocyte derived macrophages)
ASB for transcription factors
SPI1_HUMAN STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.98 0.50 5.8·10-61.00 1.22 n/a No Hit
STAT1_HUMAN 2.46 -5.04 1.2·10-41.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI allergic disease (asthma, hay fever or eczema),  self-reported allergy
GRASP asthma,  birth weight,  comorbid depressive syndrome and alcohol dependence,  eye color,  total cholesterol,  triglycerides,  years of education
Finemapping allergy
GTEx eQTL Liver

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