ADASTRA v5.1.3
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rs10180714
chr2:126997359
C
>
A
Sequence
cactcataagtgggagttgaacag[C/A]gggaacacgtggacacagggaggg
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
RARA_HUMAN
MLX_HUMAN
SP5_HUMAN
ERF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN
n/a
3.45
1.00
1.3·10
-4
2.00
n/a
No Hit
MLX_HUMAN
n/a
2.06
1.00
0.02
2.00
n/a
n/a
SP5_HUMAN
-5.22
3.04
1.00
0.02
2.00
n/a
n/a
ERF_HUMAN
-1.83
2.78
1.00
0.05
2.00
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL
Esophagus_Gastroesophageal_Junction
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)