rs1018412 chr1:168637576 G>A

Sequence
taagtgtgtgctgctatgttacat[G/A]gcatcctgtagggggagctaagcc
ASB in cell types
WA01 (H1, human embryonic stem cells) WA09 (embryonic stem cells) THP-1 (acute monocytic leukemia) neural cell
ASB for transcription factors
CTCF_HUMAN TEAD4_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.05 0.65 1.0·10-51.00 1.49 n/a No Hit
TEAD4_HUMAN -1.47 2.54 1.001.4·10-3 1.50 n/a No Hit
ANDR_HUMAN 1.97 -1.19 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

No data available

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