rs1020108 chr9:6639747 T>C
- Sequence
tacaaatagacaattaccagacca[T/C]atttaaaaatagaactttcaccca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | -0.36 | 1.16 | 1.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Spleen, Stomach, Whole_Blood