ADASTRA v5.1.3
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rs10231372
chr7:150435975
T
>
C
Sequence
tacttggtacctgaaatgaagaca[T/C]gtgggacaaagccactccagctga
ASB in cell types
germinal center B-cells
MS-1 (Small cell lung carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
germinal center B-cells
0.45
2.06
1.00
0.01
2.10
MS-1 (Small cell lung carcinoma)
1.95
-0.01
0.03
1.00
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
EMBL-EBI
electroencephalogram traits
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale