rs10240265 chr7:928918 G>T

Sequence
cattcttcgtgacagctgagaacg[G/T]gaacaagccccagctccgtgaacg
ASB in cell types
THP-1 (acute monocytic leukemia) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
SPI1_HUMAN TCF21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.68 0.45 6.5·10-61.00 1.36 n/a No Hit
TCF21_HUMAN 2.20 n/a 6.3·10-31.00 3.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

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