rs10259018 chr7:121435335 C>T
- Sequence
aaataaataaataaaacaagaaaa[C/T]gaggaagaaaattactactcatct
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | n/a | 2.41 | 1.83 | -1.09 | Weak Discordant | |||
| FOXA1_HUMAN | n/a | 2.23 | 1.50 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg