rs1044230 chr8:109540348 T>C

Sequence
gccgatttttccacaatttaaatc[T/C]cagttcacctggtatccagctcca
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) primary B-CLL cells
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) 0.30 0.88 1.001.7·10-9 1.54
primary B-CLL cells 0.04 1.30 0.820.01 2.00
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  ldl cholesterol,  tetrology of fallot,  years of education
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Colon_Transverse,  Esophagus_Muscularis,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Thyroid,  Whole_Blood

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