rs1050459 chr6:31357144 C>T
- Sequence
gagcagcaggaggacggttcgggg[C/T]gccatgaccagcatctcggcgtct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) breast tumor
- ASB for transcription factors
- IKZF2_HUMAN ESR1_HUMAN BACH1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 2.67 | n/a | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | 2.41 | n/a | 2.00 | -3.07 | Concordant | |||
| BACH1_HUMAN | 2.15 | -4.02 | 1.50 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
