rs10518242 chr19:5039124 T>G

Sequence
gggcattgtgagctgcagcgctta[T/G]gaccaagcatgaagattcccgttt
ASB in cell types
foreskin keratinocyte 22RV1 (prostate carcinoma) OCI-LY7 (diffuse large B-cell lymphoma)
ASB for transcription factors
CTCF_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.95 0.77 2.0·10-30.81 1.26 n/a No Hit
ANDR_HUMAN 2.54 n/a 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  barnes akathisia rating scale,  college completion,  homa-b,  parkinsons disease,  rheumatoid arthritis

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