rs1055084 chr20:23637851 G>A
- Sequence
cagcaggagcagcggggcgcgcag[G/A]ggcccggccatggtcggctaggac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- P66B_HUMAN IKZF1_HUMAN ESR1_HUMAN REQU_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| P66B_HUMAN | -2.71 | 2.93 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -0.57 | 2.37 | 1.25 | n/a | No Hit | |||
| ESR1_HUMAN | 2.38 | n/a | 3.00 | n/a | No Hit | |||
| REQU_HUMAN | -1.73 | 2.26 | 1.00 | n/a | n/a |
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