rs1055752 chr8:6648428 C>A
- Sequence
gataacagcccaggggaatctggg[C/A]agcactgtgaaaccaacatttctt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MEF2B_HUMAN IKZF2_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | 3.01 | -3.10 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.70 | -2.57 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.46 | -2.49 | 1.00 | 4.52 | Discordant |
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Motif analysis
