rs10741498 chr11:94960715 A>G

Sequence
gtcaaaagggctcattaacagaga[A/G]gcagtcaagcaaagcaataaagtg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
SP7_HUMAN PRDM6_HUMAN ZBT12_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP7_HUMAN -2.47 2.78 1.003.6·10-3 1.00 n/a n/a
PRDM6_HUMAN -2.90 1.94 1.008.5·10-3 1.50 n/a No Hit
ZBT12_HUMAN -1.68 1.98 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose hdl cholesterol
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Coronary Artery_Tibial Brain_Caudate_basal_ganglia Brain_Cerebellum Brain_Cortex Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Muscle_Skeletal Nerve_Tibial Pituitary Skin_Sun_Exposed_Lower_leg Spleen Stomach Testis Thyroid Whole_Blood

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