rs107589 chr7:108181276 C>T
- Sequence
taacaaatcaaagtagtgactgta[C/T]gcttggctgcctatcagtaaaaaa
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) GM12878 (female B-cells lymphoblastoid cell line) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- KDM1A_HUMAN CREB1_HUMAN HDAC1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | 0.91 | -0.67 | 1.25 | n/a | n/a | |||
| CREB1_HUMAN | 2.54 | 0.01 | 1.00 | n/a | No Hit | |||
| HDAC1_HUMAN | 1.16 | -2.26 | 1.50 | n/a | n/a |
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