rs10790546 chr11:122967718 C>A
- Sequence
tggttctattgaggatgcacagta[C/A]gtgctgaaaaaagagtcaatagtg
- ASB in cell types
- VCaP (prostate carcinoma) A1-2 (breast cancer cells)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.91 | -1.11 | 1.50 | n/a | No Hit | |||
| ANDR_HUMAN | 2.61 | -0.49 | 1.67 | n/a | No Hit | |||
| GCR_HUMAN | 2.46 | -4.99 | 1.50 | 0.39 | Weak Discordant |
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Motif analysis
