rs1079082 chr19:55581433 C>T
- Sequence
cgaccaatatttactgaatatcta[C/T]tacgggccagcctgcatatatttg
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.88 | 1.54 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, aortic valve calcium, body mass index (bmi), maternal transmission distortion, triglycerides
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood