rs1079354 chr17:77419631 C>T

Sequence
actctagaggtctctctcccggtc[C/T]ctcccccggtgctggtctaactgc
ASB for transcription factors
SP2_HUMAN ZN223_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP2_HUMAN 1.91 -3.13 8.6·10-31.00 1.50 -6.83 Concordant
ZN223_HUMAN -2.43 2.54 1.000.04 1.00 n/a n/a
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Motif analysis

SP2_HUMAN Concordant
SP2_HUMAN pic

Genetic associations

GRASP aortic valve calcium cystatin c in serum diastolic blood pressure (dbp) microalbuminuria systolic blood pressure (sbp) total cholesterol
GTEx eQTL Adipose_Visceral_Omentum Brain_Cerebellar_Hemisphere Brain_Cerebellum Heart_Left_Ventricle

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