rs10798614 chr1:178543147 C>G
- Sequence
aggcactgggcggcgctctccagc[C/G]tcctcttctcccgccgggtgcctg
- ASB in cell types
- HeLa (cervical adenocarcinoma) HEK293 (embryonic kidney) HMEC (human mammary epithelial cells) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN STAG2_HUMAN TZAP_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.75 | -0.28 | 1.04 | n/a | n/a | |||
| STAG2_HUMAN | 1.49 | -0.56 | 1.38 | n/a | n/a | |||
| TZAP_HUMAN | n/a | 3.00 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Liver, Nerve_Tibial, Spleen, Testis, Thyroid, Whole_Blood