ADASTRA v5.1.3
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rs10828247
chr10:21533927
A
>
G
Sequence
accccttcccagccctgggcgtcc[A/G]cctcccccgccacctcccaggcct
ASB in cell types
HepG2 (hepatoblastoma)
MOLT-4 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
MNT_HUMAN
MCRS1_HUMAN
CDK9_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MNT_HUMAN
1.64
-1.03
0.02
1.00
1.11
n/a
n/a
MCRS1_HUMAN
2.79
-2.86
0.03
1.00
1.00
n/a
n/a
CDK9_HUMAN
-1.17
1.34
1.00
0.03
1.00
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
bipolar disorder
,
body mass index (bmi)
,
ldl cholesterol
,
meningioma
GTEx eQTL
Artery_Tibial
,
Brain_Cerebellum
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)